Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110483715D-aspartate oxidase. (341 aa)    
Predicted Functional Partners:
AGXT
Serine--pyruvate aminotransferase.
  
 
 0.696
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
   
 
 0.691
TYSND1
Peroxisomal leader peptide-processing protease.
   
 
 0.685
SUOX
Sulfite oxidase.
      
 0.651
SCP2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.607
EPHX2
Bifunctional epoxide hydrolase 2.
  
 
 0.587
MPV17L2
Mpv17-like protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
     
 0.584
PEX14
Peroxisomal membrane protein PEX14.
     
 0.582
TMEM209
Transmembrane protein 209.
      
 0.568
PUM3
Pumilio domain-containing protein KIAA0020.
      
 0.568
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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