STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLIT1Slit 1 protein. (1548 aa)    
Predicted Functional Partners:
ROBO1
Roundabout 1.
   
 0.814
ROBO2_1
Roundabout 2.
   
 0.759
ROBO2
Roundabout 2.
   
 0.759
ROBO2-2
Roundabout, axon guidance receptor 2.
   
 0.759
ADGRL2
Latrophilin-2; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.707
ADGRL3
Latrophilin-3; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.704
PLXNC1
Plexin-C1.
   
 
 0.684
UNC5A
Netrin receptor UNC5A.
    
 
 0.683
SNCA
Alpha-synuclein; Belongs to the synuclein family.
      
 0.669
KCNC1
Potassium voltage-gated channel subfamily C member 1; Belongs to the potassium channel family.
   
 
 0.668
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.