STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBCCD1TBCC domain-containing protein 1. (554 aa)    
Predicted Functional Partners:
ICMT
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.605
GINS1
DNA replication complex GINS protein PSF1.
      
 0.602
CRTAM
Cytotoxic and regulatory T-cell molecule.
      
 0.594
BCKDHB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
      
 0.589
TLK2
Serine/threonine-protein kinase tousled-like 2.
      
 0.581
POPDC3
Popeye domain-containing protein 3.
      
 0.568
TNFRSF9
Tumor necrosis factor receptor superfamily member 9.
      
 0.563
NMNAT1
Nicotinamide-nucleotide adenylyltransferase.
      
 0.547
CCT7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
      
 0.522
ANO8
Anoctamin.
      
 0.514
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.