Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRYGSBeta-crystallin S; Belongs to the beta/gamma-crystallin family. (178 aa)    
Predicted Functional Partners:
CRYAB
Alpha-crystallin B chain; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.884
BFSP1
Filensin.
      
 0.874
NDUFAF4
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4.
    
   0.719
LOC110479438
Alpha-crystallin A chain-like.
   
 
 0.718
LOC110479434
Alpha-crystallin A chain; Belongs to the small heat shock protein (HSP20) family.
   
 
 0.718
CRYBB2
Beta-crystallin B2; Belongs to the beta/gamma-crystallin family.
   
 
 0.695
LOC110480085
Protein CXorf40A.
    
   0.614
CRYBA4
Beta-crystallin A4; Belongs to the beta/gamma-crystallin family.
   
  
 0.596
FYCO1
FYVE and coiled-coil domain-containing protein 1.
      
 0.579
LOC110472661
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.500
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.