STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB16Ankyrin repeat and SOCS box protein 16. (505 aa)    
Predicted Functional Partners:
ENSLSDP00000025664
annotation not available
  
 
  0.513
NFKBIA
NF-kappa-B inhibitor alpha.
  
  
  0.470
ANKRD34A
Ankyrin repeat domain-containing protein 34A.
  
     0.464
RFXANK
DNA-binding protein RFXANK.
  
     0.451
MTPN
Myotrophin.
  
     0.450
ASB12
Ankyrin repeat and SOCS box protein 12.
  
 
0.448
CDKN2C
Cyclin-dependent kinase 4 inhibitor C.
  
     0.444
ANKRD49
Ankyrin repeat domain-containing protein 49.
  
     0.420
IFT81
Intraflagellar transport protein 81.
    
 0.408
ANKRD22
Ankyrin repeat domain-containing protein 22.
  
     0.407
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.