Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASB16Ankyrin repeat and SOCS box protein 16. (505 aa)    
Predicted Functional Partners:
ASB12
Ankyrin repeat and SOCS box protein 12.
  
 
0.558
NEDD8
Ubiquitin-like protein Nedd8.
    
  0.546
COMMD9
COMM domain-containing protein 9.
    
  0.533
LOC110480450
COMM domain-containing protein 5.
     
  0.530
ENSLSDP00000025664
annotation not available
  
 
  0.509
NFKBIA
NF-kappa-B inhibitor alpha.
  
  
  0.492
COMMD8
COMM domain-containing protein 8.
   
  0.488
COMMD6
COMM domain-containing protein 6.
    
  0.475
COMMD7
COMM domain-containing protein 7.
    
  0.474
ASB5
Ankyrin repeat and SOCS box protein 5.
  
 
0.472
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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