STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC124Coiled-coil domain-containing protein 124. (224 aa)    
Predicted Functional Partners:
ENSLSDP00000008068
annotation not available
   
   0.984
RPS5
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.892
RPL8
60S ribosomal protein L8.
   
 
 0.880
RPL10L
60S ribosomal protein L10.
   
 
 0.878
RPL11
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.876
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.874
RPL23A
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
   0.873
RPL5
60S ribosomal protein L5.
   
   0.870
RACK1
Guanine nucleotide-binding protein subunit beta-2-like 1.
    
   0.869
RPS21
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
   0.868
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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