Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCDC124Coiled-coil domain-containing protein 124. (224 aa)    
Predicted Functional Partners:
EIF3J
Eukaryotic translation initiation factor 3 subunit J.
    
 
 0.879
SERBP1
Plasminogen activator inhibitor 1 RNA-binding protein.
   
 
 0.772
ABCE1
ATP-binding cassette sub-family E member 1.
    
 
 0.730
AURKAIP1
Aurora kinase A-interacting protein.
   
  
 0.669
RPS5
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.656
C5orf34
Uncharacterized protein C5orf34.
      
 0.648
PA2G4
Proliferation-associated protein 2G4.
   
 
 0.636
RPL8
60S ribosomal protein L8.
   
 
 0.630
RPL35
60S ribosomal protein L35.
   
 
 0.623
RPL11
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.611
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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