STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAM1Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (255 aa)    
Predicted Functional Partners:
PGK1
Phosphoglycerate kinase.
   
 0.993
ENO2
Gamma-enolase.
  
 0.981
ENO1
Alpha-enolase.
  
 0.981
TPI1
Triosephosphate isomerase.
  
 0.965
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 
 0.960
GLYCTK
Glycerate kinase.
     
 0.922
H6PD
GDH/6PGL endoplasmic bifunctional protein.
  
 0.920
PHGDH
D-3-phosphoglycerate dehydrogenase.
   
 0.913
BPGM
Bisphosphoglycerate mutase.
  
  
 
0.902
MINPP1
Multiple inositol polyphosphate phosphatase 1; Belongs to the histidine acid phosphatase family.
     
 0.901
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.