STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK10Cyclin-dependent kinase 10; Belongs to the protein kinase superfamily. (379 aa)    
Predicted Functional Partners:
CCNC
Cyclin-C; Belongs to the cyclin family.
     
 0.581
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3.
   
  
 0.544
NEK2
Serine/threonine-protein kinase Nek2.
  
  
 
0.543
CEP63
Centrosomal protein.
     
 0.535
CEP135
Centrosomal protein.
    
 0.532
CEP78
Centrosomal protein.
     
 0.522
MAPRE1
Microtubule-associated protein RP/EB family member 1.
   
 
  0.515
HAUS8
HAUS augmin-like complex subunit 8.
     
 0.511
TUBG1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 
  0.487
ENSLSDP00000002397
annotation not available
   
 
 0.468
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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