STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPG7Paraplegin. (776 aa)    
Predicted Functional Partners:
PHB
Prohibitin.
   
 0.922
PHB2
Prohibitin.
   
 0.901
MAIP1
Uncharacterized protein C2orf47, mitochondrial.
    
 0.857
AFG3L2
AFG3-like protein 2.
  
 
0.853
MRPL2
39S ribosomal protein L2, mitochondrial.
   
 
 0.826
PMPCA
Mitochondrial-processing peptidase subunit alpha.
  
 0.793
MRPS14
28S ribosomal protein S14, mitochondrial.
   
 
 0.788
MRPS12
28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.786
MRPL19
39S ribosomal protein L19, mitochondrial.
  
 
 0.782
CLPX
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial.
  
  
 0.781
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.