STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUNDC3ARUN domain-containing protein 3A. (462 aa)    
Predicted Functional Partners:
TMEM19
Transmembrane protein 19.
      
 0.578
ATXN7L3
Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.
   
  
 0.521
DCAKD
Dephospho-CoA kinase domain-containing protein.
      
 0.520
AAK1
AP2-associated protein kinase 1.
    
   0.520
AP2S1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
   0.519
ANKRD9
Ankyrin repeat domain-containing protein 9.
      
 0.517
ZNF706
Zinc finger protein 706.
      
 0.515
FBXL16
F-box/LRR-repeat protein 16.
   
  
 0.467
UVRAG
UV radiation resistance-associated gene protein.
    
 
 0.405
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.