STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAPTMicrotubule associated protein tau. (701 aa)    
Predicted Functional Partners:
YWHAZ
14-3-3 protein zeta; Belongs to the 14-3-3 family.
    
 
 0.899
GSK3B
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 
 0.887
CDK5
Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily.
    
 
 0.886
ENSLSDP00000004140
annotation not available
    
   0.879
ENSLSDP00000004644
annotation not available
    
   0.874
STUB1
STIP1 y and U box-containing protein 1.
    
 
 0.841
SNCA
Alpha-synuclein; Belongs to the synuclein family.
   
 
 0.828
APP
Amyloid beta A4 protein.
   
 
 0.768
HSPA4
Heat shock protein 4.
    
 
 0.763
CASP3
Caspase-3; Belongs to the peptidase C14A family.
    
 0.757
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.