STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35D1UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter. (302 aa)    
Predicted Functional Partners:
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 
 0.676
SLC35C1
GDP-fucose transporter 1.
   
  
 0.559
SLC35G1
Solute carrier family 35 member G1.
   
  
 0.554
SLC35A1
CMP-sialic acid transporter.
   
  
 0.538
SLC35F3
Putative thiamine transporter SLC35F3.
      
 0.533
SLC35C2
Solute carrier family 35 member C2.
   
  
 0.529
SLC35B4
UDP-xylose and UDP-N-acetylglucosamine transporter.
   
  
 0.523
SLC35B1
Solute carrier family 35 member B1.
   
  
 0.510
SLC35A5
Putative UDP-sugar transporter protein SLC35A5.
   
  
 0.509
SLC35E3
Solute carrier family 35 member E3.
      
 0.499
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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