STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXRA8Matrix-remodeling-associated protein 8. (436 aa)    
Predicted Functional Partners:
LDLRAD3
Low-density lipoprotein receptor class A domain-containing protein 3.
      
 0.583
MXRA7
Matrix-remodeling-associated protein 7.
      
 0.531
MEAK7
TLD domain-containing protein 1.
      
 0.526
PTPRU
Receptor-type tyrosine-protein phosphatase U.
      
 0.514
FAM20A
Protein FAM20A.
     
 0.490
ENSLSDP00000020135
annotation not available
   
  
 0.460
FAM20B
Glycosaminoglycan xylosylkinase.
     
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.