Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MXRA8Matrix-remodeling-associated protein 8. (436 aa)    
Predicted Functional Partners:
PHB
Prohibitin.
      
 0.874
LDLRAD3
Low-density lipoprotein receptor class A domain-containing protein 3.
      
 0.873
TM6SF1
Transmembrane 6 superfamily member 1.
      
 0.823
ACAP3
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3.
      
 0.674
INTS11
Integrator complex subunit 11.
      
 0.673
MEAK7
TLD domain-containing protein 1.
      
 0.623
FAM20C
Extracellular serine/threonine protein kinase FAM20C.
     
  0.616
MXRA7
Matrix-remodeling-associated protein 7.
      
 0.596
PUSL1
tRNA pseudouridine synthase.
      
 0.567
B4GALT7
Beta-1,4-galactosyltransferase 7.
      
 0.550
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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