Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX18Sorting nexin-18. (598 aa)    
Predicted Functional Partners:
SNX9
Sorting nexin.
  
 
0.972
SNX33
Sorting nexin.
  
  
 
0.901
PIK3C2A
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha; Belongs to the PI3/PI4-kinase family.
     
 0.789
PIK3C2B
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta; Belongs to the PI3/PI4-kinase family.
     
 0.789
PIK3C2G
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.789
AP2M1
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.736
GAK
Cyclin-G-associated kinase.
     
 0.706
TNK2
Activated CDC42 kinase 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 
 0.699
ITSN2
Intersectin-2.
     
 0.675
PIK3CA
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
    
  0.654
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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