Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000007518annotation not available (174 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.912
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 0.910
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
 
      0.899
HNRNPC
Heterogeneous nuclear ribonucleoprotein C-like 1.
   
 0.855
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D-like.
   
 0.830
HNRNPUL2
Heterogeneous nuclear ribonucleoprotein U-like protein 1.
   
 0.765
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.765
SYNCRIP
Heterogeneous nuclear ribonucleoprotein Q.
   
 0.756
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 0.756
PTBP1
Polypyrimidine tract-binding protein 1.
   
 0.739
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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