STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPLHeterogeneous nuclear ribonucleoprotein L. (253 aa)    
Predicted Functional Partners:
ENSLSDP00000007518
annotation not available
 
      0.899
UBE2I
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.723
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.704
HNRNPA2B1
Heterogeneous nuclear ribonucleoproteins A2/B1.
   
 0.665
TAF15
TATA-binding protein-associated factor 2N.
   
 0.626
HNRNPC
Heterogeneous nuclear ribonucleoprotein C-like 1.
   
 0.625
PTBP1
Polypyrimidine tract-binding protein 1.
   
0.624
PTBP3
Polypyrimidine tract-binding protein 3.
   
0.624
PTBP2
Polypyrimidine tract-binding protein 2.
   
 0.619
SRSF2
Serine/arginine-rich splicing factor 2.
   
 0.611
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.