Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GPR161G-protein coupled receptor 161; Belongs to the G-protein coupled receptor 1 family. (545 aa)    
Predicted Functional Partners:
ARRB1
Beta-arrestin-1.
   
 0.927
PRKACB
cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
    
 0.925
EVC2
Ellis van creveld syndrome protein 2.
      
 0.848
TULP3
Tubby-related protein 3; Belongs to the TUB family.
    
 0.797
IFT88
Intraflagellar transport protein 88.
     
 0.728
IFT122
Intraflagellar transport protein 122.
     
 0.715
PRKX
cAMP-dependent protein kinase catalytic subunit PRKX.
    
 0.700
SMO
Smoothened; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.698
ARL13B
ADP-ribosylation factor-like protein 13B.
      
 0.683
IFT140
Intraflagellar transport protein 140.
     
 0.679
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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