STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR161G-protein coupled receptor 161; Belongs to the G-protein coupled receptor 1 family. (545 aa)    
Predicted Functional Partners:
ARRB1
Beta-arrestin-1.
   
 0.931
PRKACB
cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.
    
 0.777
IFT122
Intraflagellar transport protein 122.
     
 0.701
TULP3
Tubby-related protein 3; Belongs to the TUB family.
     
 0.682
TTC21B
Tetratricopeptide repeat protein 21B.
     
 0.664
IFT140
Intraflagellar transport protein 140.
     
 0.659
PRKX
cAMP-dependent protein kinase catalytic subunit PRKX.
    
 0.621
EVC2
Ellis van creveld syndrome protein 2.
      
 0.605
WDR35
WD repeat-containing protein 35.
     
 0.600
WDR19
WD repeat-containing protein 19.
     
 0.593
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.