STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIPRLTIP41-like protein. (341 aa)    
Predicted Functional Partners:
LOC110482800
Serine/threonine-protein phosphatase.
    
 0.785
PPP6C
Serine/threonine-protein phosphatase.
   
 0.769
PPP2CA
Serine/threonine-protein phosphatase.
    
 0.745
PPP2CB
Serine/threonine-protein phosphatase.
    
 0.745
IGBP1
Immunoglobulin-binding protein 1 isoform X1.
    
 
 0.667
PPP4C
Serine/threonine-protein phosphatase.
    
 0.648
TBCEL
Tubulin-specific chaperone cofactor E-like protein.
      
 0.620
PPP4R2
Serine/threonine-protein phosphatase 4 regulatory subunit 2.
    
 
 0.612
ATP7B
Copper-transporting ATPase 2.
  
 
 0.542
ATP7A
Copper-transporting ATPase 1.
  
 
 0.542
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.