Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000007545annotation not available (425 aa)    
Predicted Functional Partners:
GAPDH
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.951
TPI1
Triosephosphate isomerase.
  
 0.919
LOC110471010
Fructose-1,6-bisphosphatase isozyme 2; Belongs to the FBPase class 1 family.
  
 0.807
LOC110471011
Fructose-1,6-bisphosphatase 1; Belongs to the FBPase class 1 family.
  
 0.807
PGK1
Phosphoglycerate kinase.
  
 0.777
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 0.759
TKT
Transketolase.
  
 0.713
MYCBPAP
MYCBP associated protein.
  
 0.671
BCKDHB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
  
 
 0.668
PFKM
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
  
 0.664
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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