STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110480573Metabotropic glutamate receptor 6. (632 aa)    
Predicted Functional Partners:
ENSLSDP00000024210
annotation not available
 
      0.540
NME8
Thioredoxin domain-containing protein 3; Belongs to the NDK family.
    
   0.539
WDR90
WD repeat-containing protein 90.
    
   0.507
GRM2
Metabotropic glutamate receptor 2.
   
  0.491
GNB1
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
    
 0.484
GNB4
G protein subunit beta 4.
    
 0.484
GNB3
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.
    
 0.465
GRM3
Metabotropic glutamate receptor 3.
   
  0.458
NPY5R
Neuropeptide Y receptor type 5.
   
 
 0.439
GNAO1
Guanine nucleotide-binding protein G(O) subunit alpha.
    
 0.426
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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