STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000007557annotation not available (143 aa)    
Predicted Functional Partners:
ITFG2
Integrin-alpha FG-GAP repeat-containing protein 2.
    
 0.987
C12orf66
UPF0536 protein C12orf66.
    
 0.987
NPRL3
Nitrogen permease regulator 3-like protein.
    
 0.980
NPRL2
Nitrogen permease regulator 2-like protein.
   
 0.980
DEPDC5
DEP domain-containing protein 5.
    
 0.977
WDR24
WD repeat-containing protein 24.
   
 0.975
MIOS
WD repeat-containing protein mio.
    
 0.973
SEH1L
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.971
WDR59
WD repeat-containing protein 59.
    
 0.970
LAMP1
Lysosome-associated membrane glycoprotein 1.
    
   0.905
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.