Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DPTDermatopontin. (199 aa)    
Predicted Functional Partners:
DCN
Decorin; May affect the rate of fibrils formation.
   
  
 0.630
ECM2
Extracellular matrix protein 2.
   
  
 0.574
LUM
Lumican.
   
  
 0.555
PRELP
Prolargin.
   
  
 0.530
LOC110470070
Cytochrome c oxidase subunit 6C-2.
      
 0.507
FMOD
Fibromodulin.
   
  
 0.484
OGN
Mimecan.
   
  
 0.442
CTHRC1
Collagen triple helix repeat-containing protein 1.
      
 0.431
FH
Fumarate hydratase, mitochondrial.
      
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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