STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAPAAlpha-soluble NSF attachment protein. (450 aa)    
Predicted Functional Partners:
NSF
Vesicle-fusing ATPase.
   
 0.968
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.968
SCFD1
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.949
STX5
Syntaxin-5.
    
 0.949
STX16
Syntaxin-16; Belongs to the syntaxin family.
    
 0.940
GAK
Cyclin-G-associated kinase.
    
 0.939
YKT6
Synaptobrevin YKT6; Belongs to the synaptobrevin family.
    
 0.928
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.902
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.895
STX6
Syntaxin-6; Belongs to the syntaxin family.
    
 0.894
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.