close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA1Integrin alpha-1; Belongs to the integrin alpha chain family. (1171 aa)    
Predicted Functional Partners:
ITGB5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.966
PXN
Paxillin; Belongs to the paxillin family.
    
 0.961
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.952
ITGB3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.950
LAMA2
Laminin subunit alpha-2.
    
 0.943
LAMA4
Laminin subunit alpha-4.
   
 0.924
COL4A6
Collagen alpha-6(IV) chain.
     
 0.923
COL4A1_0
Collagen alpha-1(IV) chain.
     
 0.923
COL4A4
Collagen alpha-4(IV) chain.
     
 0.923
COL4A1
Collagen alpha-1(IV) chain.
     
 0.923
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.