STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110482554Cytochrome P450 4F22; Belongs to the cytochrome P450 family. (523 aa)    
Predicted Functional Partners:
AASDH
Acyl-CoA synthetase family member 4.
  
 0.625
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.623
SQLE
Squalene monooxygenase.
   
 0.603
HSD17B7
3-keto-steroid reductase.
    
 
 0.519
ENSLSDP00000001561
annotation not available
  
 0.513
FASN
Fatty acid synthase.
  
 0.478
SC5D
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.458
WRN
Werner syndrome ATP-dependent helicase.
    
 0.443
DHCR7
7-dehydrocholesterol reductase.
   
 0.432
LBR
Lamin-B receptor.
   
 0.432
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.