Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PELOProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)    
Predicted Functional Partners:
HBS1L
HBS1-like protein.
   
 0.989
ABCE1
ATP-binding cassette sub-family E member 1.
  
 
 0.869
ENSLSDP00000003776
annotation not available
    
 
 0.766
ENSLSDP00000008068
annotation not available
    
 
 0.753
RPL35
60S ribosomal protein L35.
   
 
 0.737
RAD9B
Cell cycle checkpoint control protein; Belongs to the rad9 family.
      
 0.719
MTO1
Protein MTO1, mitochondrial.
      
 0.675
SGSM3
Small G protein signaling modulator 3.
   
  
 0.665
RPS10
40S ribosomal protein S10.
    
 
 0.661
RPS3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.659
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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