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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PELOProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)    
Predicted Functional Partners:
HBS1L
HBS1-like protein.
   
 
 0.990
ENSLSDP00000008068
annotation not available
    
 
 0.986
RACK1
Guanine nucleotide-binding protein subunit beta-2-like 1.
    
 
 0.938
ABCE1
ATP-binding cassette sub-family E member 1.
  
 
 0.926
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 
 0.910
RPS3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.907
RPS20
40S ribosomal protein S20.
    
 
 0.900
RPS10
40S ribosomal protein S10.
    
 
 0.892
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 
 0.886
RPS23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.883
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.