Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110482557Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial. (347 aa)    
Predicted Functional Partners:
IDH3A
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.999
ACO2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.993
IDH1
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.974
OGDH
2-oxoglutarate dehydrogenase, mitochondrial.
  
 0.971
OGDHL
2-oxoglutarate dehydrogenase-like, mitochondrial.
  
 0.971
IDH2
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.971
ACO1
Cytoplasmic aconitate hydratase; Belongs to the aconitase/IPM isomerase family.
  
 0.968
IDH3B
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
  
 
0.913
GLUD1
Glutamate dehydrogenase 1, mitochondrial; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.896
GOT2
Aspartate aminotransferase.
   
 0.881
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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