STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1CAMNeural cell adhesion molecule L1. (161 aa)    
Predicted Functional Partners:
LOC110479785
Neural cell adhesion molecule L1-like protein.
 
      0.720
CNTN2
Contactin-2.
 
 
 0.676
PTPRG
Receptor-type tyrosine-protein phosphatase gamma.
    
 0.623
ENSLSDP00000010434
annotation not available
    
 0.611
CNTN6
Contactin-6.
 
  
 0.604
NRP1
Neuropilin; Belongs to the neuropilin family.
    
 0.571
CNTN5
Contactin-5.
 
 
 0.571
CNTN3
Contactin-3.
 
  
 0.564
LOC110469855
Contactin-4.
 
  
 0.560
CNTN1
Contactin-1.
 
 
 0.555
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.