STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000007649annotation not available (183 aa)    
Predicted Functional Partners:
ACTN4
Alpha-actinin-4.
 
      0.899
VCL
Vinculin.
   
 
 0.703
MYL1
Myosin light chain 1, skeletal muscle isoform.
   
 0.668
MYOZ1
Myozenin-1.
   
 
 0.578
TNNI2
Troponin I, fast skeletal muscle.
   
 0.570
SMIM20
Small integral membrane protein 20.
   
 0.556
TNNT3
Troponin T, fast skeletal muscle isoform.
   
 0.556
TNNT2
Troponin T2, cardiac type.
   
 0.556
SPTAN1
Spectrin alpha chain, non-erythrocytic 1.
 
 
 0.544
ITSN2
Intersectin-2.
   
 
 0.542
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.