STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INTUProtein inturned. (916 aa)    
Predicted Functional Partners:
MAD2L1
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.951
LOC110478774
E3 SUMO-protein ligase RanBP2.
   
 0.950
WDPCP
WD repeat-containing and planar cell polarity effector protein fritz.
   
 
 0.935
CDC27
Cell division cycle protein 27.
   
 0.926
CDC16
Cell division cycle protein 16.
   
 0.923
UBE2C
Ubiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.922
ANAPC4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
   
 0.920
ANAPC1
Anaphase-promoting complex subunit 1.
    
 0.916
CDC23
Cell division cycle protein 23.
   
 0.916
BUB3
Mitotic checkpoint protein BUB3.
   
 0.911
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.