Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CTDNEP1-2CTD nuclear envelope phosphatase 1. (260 aa)    
Predicted Functional Partners:
CNEP1R1
Nuclear envelope phosphatase-regulatory subunit 1.
   
 0.877
LPIN1
Phosphatidate phosphatase LPIN1.
    
 0.809
LPIN2
Phosphatidate phosphatase LPIN2.
    
 0.793
LPIN3
Phosphatidate phosphatase LPIN3.
    
 0.793
P4HA1
Prolyl 4-hydroxylase subunit alpha-1.
      
 0.579
MAL2
Protein MAL2.
      
 0.576
KBTBD4
Kelch repeat and BTB domain-containing protein 4.
   
  
 0.574
GFM2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
      
 0.567
MAN1B1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.566
SLC35G2
Solute carrier family 35 member G2.
      
 0.554
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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