STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYBACytochrome b-245 light chain. (182 aa)    
Predicted Functional Partners:
CYBB
Cytochrome b-245 heavy chain.
   
 0.984
NCF1
Neutrophil cytosol factor 1.
   
 0.938
NOX4
NADPH oxidase 4.
   
 0.905
NOXO1
NADPH oxidase organizer 1.
    
 0.903
NOX5
NADPH oxidase 5.
   
 0.843
NCF4
Neutrophil cytosol factor 4.
   
 0.830
NOX1
NADPH oxidase 1.
   
 0.816
NCF2
Neutrophil cytosol factor 2.
   
 0.815
NCF2_1
Neutrophil cytosol factor 2.
   
 0.815
RAC2
Ras-related C3 botulinum toxin substrate 2.
   
 
 0.810
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.