STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F5Coagulation factor V; Belongs to the multicopper oxidase family. (1901 aa)    
Predicted Functional Partners:
F2
Prothrombin; Belongs to the peptidase S1 family.
    
 0.970
PROS1
Vitamin K-dependent protein S.
   
 0.748
PROC
Vitamin K-dependent protein C.
    
 0.725
F9_0
Coagulation factor IX; Belongs to the peptidase S1 family.
   
 0.642
F9
Coagulation factor IX.
   
 0.642
F7
Coagulation factor VII; Belongs to the peptidase S1 family.
   
 0.642
F10
Coagulation factor X; Belongs to the peptidase S1 family.
   
 0.642
PROZ
Vitamin K-dependent protein Z.
   
 0.642
MCFD2
Multiple coagulation factor deficiency protein 2.
     
 0.639
LMAN1
Protein ERGIC-53.
    
 0.624
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.