STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP1BLow-density lipoprotein receptor-related protein 1B. (1818 aa)    
Predicted Functional Partners:
AGRN
Agrin.
    
 0.637
ITSN2
Intersectin-2.
    
 0.635
LDLRAP1
Low density lipoprotein receptor adapter protein 1-B.
    
 0.589
PCSK9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.587
DAB1
Disabled 1.
    
 0.539
DAB2
Disabled 2.
    
 0.537
KREMEN1
Kremen protein; Receptor for Dickkopf proteins. Cooperates with DKK1/2 to inhibit Wnt/beta-catenin signaling by promoting the endocytosis of Wnt receptors LRP5 and LRP6.
    
 0.521
AXIN1
Axin-1.
    
 0.486
AXIN2
Axin-2.
    
 0.486
APOB
Apolipoprotein B-100.
    
 0.483
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.