STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
LOC110478812Polypeptide N-acetylgalactosaminyltransferase 13. (169 aa)    
Predicted Functional Partners:
ST6GALNAC1
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1; Belongs to the glycosyltransferase 29 family.
     
 0.914
GCNT1
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase.
     
 0.914
C1GALT1C1
C1GALT1-specific chaperone 1.
     
 0.749
C1GALT1
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1.
     
 0.724
GALNT14
Polypeptide N-acetylgalactosaminyltransferase.
    
  0.486
FGF23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
     
 0.467
PRPF40A
Pre-mRNA-processing factor 40 A.
      
 0.408
GALNT16
Polypeptide N-acetylgalactosaminyltransferase.
    
  0.407
GALNT2
Polypeptide N-acetylgalactosaminyltransferase.
    
  0.405
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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