STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRIPTCysteine-rich PDZ-binding protein. (101 aa)    
Predicted Functional Partners:
ARMC7
Armadillo repeat-containing protein 7.
    
 
 0.837
PHF5A
PHD finger-like domain-containing protein 5A.
   
   0.762
SF3B1
Splicing factor 3B subunit 1.
    
   0.757
SF3B2
Splicing factor 3B subunit 2.
    
   0.757
PRPF8
Pre-mRNA-processing-splicing factor 8.
    
   0.757
SF3B3
Splicing factor 3B subunit 3.
    
   0.757
LOC110474826
RING finger protein 113A.
    
   0.603
LOC110482607
RING finger protein 113A.
    
   0.603
ENSLSDP00000004646
annotation not available
    
 
 0.573
CWC15
Spliceosome-associated protein CWC15.
   
   0.558
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.