STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000007714annotation not available (96 aa)    
Predicted Functional Partners:
CXCL12
Stromal cell-derived factor 1; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.954
ENSLSDP00000017097
annotation not available
    
 0.940
LOC110475885
C-C motif chemokine.
    
 0.936
RLOC_00015097
C-C motif chemokine.
    
 0.930
CXCL14
C-X-C motif chemokine 14.
    
 
 0.920
LOC110481878
C-C motif chemokine 5.
    
 0.920
LOC110480732
SCY domain-containing protein.
    
 0.867
CCR10
C-C chemokine receptor type 10; Belongs to the G-protein coupled receptor 1 family.
    
 0.837
ENSLSDP00000017096
C-X-C motif chemokine 6-like.
    
 0.742
LOC110471206
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.742
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.