STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKISki oncogene. (714 aa)    
Predicted Functional Partners:
SMAD4_0
Mothers against decapentaplegic homolog.
   
 0.935
SNAPIN
Mothers against decapentaplegic homolog 4-like.
   
 0.935
SMAD3
Mothers against decapentaplegic homolog.
   
 0.902
SMAD2
Mothers against decapentaplegic homolog.
   
 0.902
SMAD5
Mothers against decapentaplegic homolog.
   
 0.756
SMAD1
Mothers against decapentaplegic homolog.
   
 0.754
SMAD9
Mothers against decapentaplegic homolog.
   
 0.754
INTS8
Integrator complex subunit 8.
   
 0.677
NCOR2
Nuclear receptor corepressor 2.
   
 0.670
NCOR1
Nuclear receptor corepressor 1.
   
 0.670
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.