STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIM1KSerine/threonine-protein kinase NIM1; Belongs to the protein kinase superfamily. (442 aa)    
Predicted Functional Partners:
ENSLSDP00000016652
annotation not available
    
 
 0.581
PRKAB1
5'-AMP-activated protein kinase subunit beta-1.
    
 0.578
PRKAB2
5'-AMP-activated protein kinase subunit beta-2.
    
 0.578
PRKAG1
5'-AMP-activated protein kinase subunit gamma-1.
   
 0.539
PRKAG3
5'-AMP-activated protein kinase subunit gamma-3.
   
 0.539
PRKAG2
5'-AMP-activated protein kinase subunit gamma-2.
   
 0.539
YARS1
Tyrosine--tRNA ligase.
      
 0.515
RPTOR
Regulatory-associated protein of mTOR.
    
 0.503
STOML2
Stomatin-like protein 2, mitochondrial.
      
 0.493
AMPD3
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
   
  
 0.466
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.