STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPAS1Endothelial PAS domain-containing protein 1. (866 aa)    
Predicted Functional Partners:
VHL
Von Hippel-Lindau disease tumor suppressor.
    
 0.968
UBXN7
UBX domain-containing protein 7.
    
 0.953
ARNT
Aryl hydrocarbon receptor nuclear translocator.
   
0.900
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2.
   
0.900
CREBBP
CREB-binding protein.
    
 0.881
HIF1AN
Hypoxia-inducible factor 1-alpha inhibitor.
    
 0.880
EP300
Histone acetyltransferase p300.
    
 0.879
ELOC
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.875
EGLN3
Egl nine 3.
    
 0.856
EGLN1
Egl nine 1.
    
 0.856
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.