Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JPH3Junctophilin-3. (624 aa)    
Predicted Functional Partners:
ENSLSDP00000002547
annotation not available
 
   
  0.951
JPH3-2
Junctophilin-3.
 
   
  0.951
WDR90
WD repeat-containing protein 90.
    
 0.566
LOC110476176
Junctophilin-2.
     
 
0.540
JPH1
Junctophilin; Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels.
     
 
0.540
RABGEF1
Rab5 GDP/GTP exchange factor.
    
 0.530
NME8
Thioredoxin domain-containing protein 3; Belongs to the NDK family.
    
 
 0.524
TRDN
Triadin.
   
 
 0.418
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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