Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000007797annotation not available (111 aa)    
Predicted Functional Partners:
RPP25
Cytochrome c oxidase subunit 5A, mitochondrial.
    
 
 0.866
CUNH18orf21
UPF0711 protein C18orf21.
    
 
 0.865
RPP30
Ribonuclease P protein subunit p30.
    
 
 0.864
POP4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 
 0.850
RPP38
Ribonuclease P protein subunit p38.
   
 
 0.822
RPP25L
Ribonuclease P protein subunit p25-like protein.
    
 
 0.728
NPM1
Nucleophosmin.
    
   0.716
POP1
Ribonucleases P/MRP protein subunit POP1.
    
   0.671
POP5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
   0.607
NPM3
Nucleophosmin 3.
    
   0.587
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (28%) [HD]