STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFAP2BTranscription factor AP-2-beta. (460 aa)    
Predicted Functional Partners:
WWOX
WW domain-containing oxidoreductase.
    
 0.622
KCTD1
BTB/POZ domain-containing protein KCTD1.
    
 0.597
KCTD15
BTB/POZ domain-containing protein kctd15.
    
 0.597
CITED2
Cbp/p300-interacting transactivator 2.
    
 0.567
YEATS4
YEATS domain-containing protein 4.
    
 0.539
DEK
Protein DEK.
    
 0.535
ENSLSDP00000022546
annotation not available
    
 0.479
NPM1
Nucleophosmin.
   
  0.470
TFAP2C
Transcription factor AP-2 gamma.
  
0.466
UBE2I
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.457
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.