STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHCHD1Coiled-coil-helix-coiled-coil-helix domain-containing protein 1. (123 aa)    
Predicted Functional Partners:
MRPS16
28S ribosomal protein S16, mitochondrial.
   
  0.992
MRPS28
28S ribosomal protein S28, mitochondrial.
   
  0.988
MRPS24
28S ribosomal protein S24, mitochondrial.
   
 0.988
MRPS33
28S ribosomal protein S33, mitochondrial.
   
 0.987
MRPS14
28S ribosomal protein S14, mitochondrial.
   
  0.987
MRPS23
28S ribosomal protein S23, mitochondrial.
   
  0.987
MRPS17
28S ribosomal protein S17, mitochondrial.
   
 0.986
MRPS10
28S ribosomal protein S10, mitochondrial.
   
  0.986
PTCD3
Pentatricopeptide repeat domain-containing protein 3, mitochondrial.
    
 0.985
MRPS7
28S ribosomal protein S7, mitochondrial.
   
 0.985
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.