Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CHCHD1Coiled-coil-helix-coiled-coil-helix domain-containing protein 1. (123 aa)    
Predicted Functional Partners:
MRPS14
28S ribosomal protein S14, mitochondrial.
   
  0.994
AURKAIP1
Aurora kinase A-interacting protein.
   
 0.992
MRPS16
28S ribosomal protein S16, mitochondrial.
   
 0.991
MRPS17
28S ribosomal protein S17, mitochondrial.
   
 0.991
MRPS33
28S ribosomal protein S33, mitochondrial.
   
 0.990
MRPS28
28S ribosomal protein S28, mitochondrial.
   
  0.990
MRPS21
28S ribosomal protein S21, mitochondrial.
   
  0.990
MRPS7
28S ribosomal protein S7, mitochondrial.
   
 0.990
MRPS11
28S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family.
   
  0.990
MRPS12
28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
   
  0.989
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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