ZSWIM8 protein (Lonchura striata) - STRING interaction network

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Score

ZSWIM8

Zinc finger SWIM domain-containing protein 8. (1822 aa)

Predicted Functional Partners:

ELOC

0.907

CUL3

0.784

AGO2

0.781

ELOB

0.679

ECM1

0.676

MRPS14

0.599

CUL2

0.590

LOC110474354

0.575

RBX1

0.571

ZBTB44

0.568

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGO2	CUL3	ENSLSDP00000001663	ENSLSDP00000006776	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	Cullin-3; Belongs to the cullin family.	0.607
AGO2	ELOC	ENSLSDP00000001663	ENSLSDP00000018921	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.	0.579
AGO2	ZSWIM8	ENSLSDP00000001663	ENSLSDP00000007867	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	Zinc finger SWIM domain-containing protein 8.	0.781
CUL2	CUL3	ENSLSDP00000002088	ENSLSDP00000006776	Cullin-2; Belongs to the cullin family.	Cullin-3; Belongs to the cullin family.	0.626
CUL2	ELOB	ENSLSDP00000002088	ENSLSDP00000015015	Cullin-2; Belongs to the cullin family.	Transcription elongation factor B polypeptide 2.	0.967
CUL2	ELOC	ENSLSDP00000002088	ENSLSDP00000018921	Cullin-2; Belongs to the cullin family.	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.	0.968
CUL2	RBX1	ENSLSDP00000002088	ENSLSDP00000003394	Cullin-2; Belongs to the cullin family.	E3 ubiquitin-protein ligase RBX1.	0.913
CUL2	ZSWIM8	ENSLSDP00000002088	ENSLSDP00000007867	Cullin-2; Belongs to the cullin family.	Zinc finger SWIM domain-containing protein 8.	0.590
CUL3	AGO2	ENSLSDP00000006776	ENSLSDP00000001663	Cullin-3; Belongs to the cullin family.	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	0.607
CUL3	CUL2	ENSLSDP00000006776	ENSLSDP00000002088	Cullin-3; Belongs to the cullin family.	Cullin-2; Belongs to the cullin family.	0.626
CUL3	ELOB	ENSLSDP00000006776	ENSLSDP00000015015	Cullin-3; Belongs to the cullin family.	Transcription elongation factor B polypeptide 2.	0.646
CUL3	ELOC	ENSLSDP00000006776	ENSLSDP00000018921	Cullin-3; Belongs to the cullin family.	Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.	0.964
CUL3	RBX1	ENSLSDP00000006776	ENSLSDP00000003394	Cullin-3; Belongs to the cullin family.	E3 ubiquitin-protein ligase RBX1.	0.999
CUL3	ZSWIM8	ENSLSDP00000006776	ENSLSDP00000007867	Cullin-3; Belongs to the cullin family.	Zinc finger SWIM domain-containing protein 8.	0.784
ECM1	LOC110474354	ENSLSDP00000016679	ENSLSDP00000020793	Extracellular matrix protein 1.	Transcription initiation factor TFIID subunit 9.	0.795
ECM1	MRPS14	ENSLSDP00000016679	ENSLSDP00000016452	Extracellular matrix protein 1.	28S ribosomal protein S14, mitochondrial.	0.874
ECM1	ZBTB44	ENSLSDP00000016679	ENSLSDP00000011143	Extracellular matrix protein 1.	Zinc finger and BTB domain-containing protein 44.	0.778
ECM1	ZSWIM8	ENSLSDP00000016679	ENSLSDP00000007867	Extracellular matrix protein 1.	Zinc finger SWIM domain-containing protein 8.	0.676
ELOB	CUL2	ENSLSDP00000015015	ENSLSDP00000002088	Transcription elongation factor B polypeptide 2.	Cullin-2; Belongs to the cullin family.	0.967
ELOB	CUL3	ENSLSDP00000015015	ENSLSDP00000006776	Transcription elongation factor B polypeptide 2.	Cullin-3; Belongs to the cullin family.	0.646