STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATF4Cyclic AMP-dependent transcription factor ATF-4. (354 aa)    
Predicted Functional Partners:
EIF2S1
Eukaryotic translation initiation factor 2 subunit 1.
     
 0.966
CEBPB
CCAAT/enhancer-binding protein.
   
 0.954
CEBPG
CCAAT/enhancer-binding protein gamma.
   
 0.949
ATF2
Cyclic AMP-dependent transcription factor ATF-2.
    
 0.942
CREB5
Cyclic AMP-responsive element-binding protein 5.
    
 0.936
CREB1
Cyclic AMP-responsive element-binding protein 1.
    
 0.925
CREB3
Cyclic AMP-responsive element-binding protein 3.
     
 0.907
RPS6KA3
Ribosomal protein S6 kinase.
     
 0.905
RPS6KA1
Non-specific serine/threonine protein kinase.
     
 0.905
LOC110477804
Ribosomal protein S6 kinase.
     
 0.905
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.