STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC14L1SEC14-like protein 1. (715 aa)    
Predicted Functional Partners:
PCYT1A
Choline-phosphate cytidylyltransferase A.
    
 
 0.632
SESTD1
SEC14 domain and spectrin repeat-containing protein 1.
      
 0.601
SUMF1
Sulfatase-modifying factor 1.
    
  0.579
METTL23
Methyltransferase-like protein 23.
      
 0.519
MFSD11
UNC93-like protein MFSD11.
      
 0.519
PLD1
Phospholipase.
   
 
 0.494
DENND3
DENN domain-containing protein 3.
      
 0.432
ANKFY1
Rabankyrin-5.
    
 0.413
AP1G1
AP-1 complex subunit gamma.
    
 0.413
SEC63
Translocation protein SEC63.
   
 
 0.410
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.