Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MARCHF11E3 ubiquitin-protein ligase MARCH11. (412 aa)    
Predicted Functional Partners:
RAVER2
Ribonucleoprotein PTB-binding 2.
      
 0.676
MARCHF6
E3 ubiquitin-protein ligase MARCH6.
   
  
 0.560
OTULINL
Inactive ubiquitin thioesterase FAM105A.
      
 0.539
MARCHF7
E3 ubiquitin-protein ligase MARCH7.
      
 0.520
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 
 0.459
NUP214
Nuclear pore complex protein Nup214.
   
  
 0.458
TMEM233
Transmembrane protein 233.
      
 0.453
UBE2J2
Ubiquitin-conjugating enzyme E2 J2.
    
 
 0.440
C1QTNF12
Adipolin.
    
 
 0.440
UBE2G2
Ubiquitin-conjugating enzyme E2 G2; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.430
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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