Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
FBXL7F-box/LRR-repeat protein 7. (530 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.982
CUL1
Cullin-1; Belongs to the cullin family.
   
 0.977
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.960
OPN1SW
Ultraviolet-sensitive opsin.
      
 0.729
FBXO16
F-box only protein 16.
   
 0.725
LOC110484624
Baculoviral IAP repeat-containing protein 5.1.
    
 
 0.721
BIRC5
Baculoviral IAP repeat-containing protein 5-like.
    
 
 0.721
FBXO25
F-box only protein 25.
     
 0.718
FAF1
FAS-associated factor 1.
   
 
 0.690
CRYBB2
Beta-crystallin B2; Belongs to the beta/gamma-crystallin family.
      
 0.679
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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