Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
LOC110478825RNA-binding protein 4. (368 aa)    
Predicted Functional Partners:
RPP25
Cytochrome c oxidase subunit 5A, mitochondrial.
    
   0.717
IER3IP1
Immediate early response 3-interacting protein 1.
      
 0.686
RTN4RL2
Reticulon-4 receptor-like 2.
      
 0.669
RPP38
Ribonuclease P protein subunit p38.
   
 
 0.649
RPL26L1
60S ribosomal protein L26.
   
 
 0.617
GPATCH4
G patch domain-containing protein 4.
    
   0.607
POP4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
   0.604
SRSF10
Serine/arginine-rich splicing factor 10.
   
 0.600
PURG
Purine-rich element-binding protein gamma.
    
 
 0.564
PURA
Transcriptional activator protein Pur-alpha.
    
 
 0.564
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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